Spa_g28967

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g28967

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00134p00069640	ABCG25,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Ala_g02542	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07219	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10922.t1	Aspi01Gene10922	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene71266.t1	Aspi01Gene71266	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09211	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Len_g07347	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Len_g57983	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_4863g0010	ABCG26, WBC27	sporopollenin precursor exporter. subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Ore_g29229	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15519	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013631	No alias	subfamily ABCG transporter & original description: CDS=1-2199	0.03	OrthoFinder output from all 47 species
Solyc04g070970.4.1	Solyc04g070970	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Tin_g28498	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e037432_P001	ABCG26, WBC27,...	sporopollenin precursor exporter. subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	546	755
IPR003439	ABC_transporter-like_ATP-bd	212	361

External Links

No external refs found!

Spa_g28967

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation