Spa_g28590


Description : not classified & original description: none


Gene families : OG0000006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g28590

Target Alias Description ECC score Gene Family Method Actions
Adi_g031699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_25173 ORF102 Putative ribonuclease H protein At1g65750 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g22641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36576 ORF102 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c11_7590V3.1 Pp3c11_7590 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c17_3030V3.1 Pp3c17_3030 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c19_21430V3.1 Pp3c19_21430 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c7_17360V3.1 Pp3c7_17360 No annotation 0.02 OrthoFinder output from all 47 species
Sam_g26746 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g03559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!