Spa_g28280

Description : not classified & original description: none

Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g28280

Target	Alias	Description	ECC score	Gene Family Method
Adi_g080529	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g09611	No alias	regulatory protein *(RCF3) of HYL1-phosphorylation &...	0.03	OrthoFinder output from all 47 species
Dcu_g12897	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g04773	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g06520	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g38350	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06368	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g11392	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g02804	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	74	107

External Links

No external refs found!