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  5. Spa_g28076

Spa_g28076 (UPL1)


Aliases : UPL1

Description : not classified & original description: none


Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g28076

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00204480 UPL1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT1G70320 UPL2 ubiquitin-protein ligase 2 0.03 OrthoFinder output from all 47 species
Adi_g016298 UPL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026954 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076223 UPL2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g077941 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087677 UPL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g107426 UPL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g04900 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16628 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06583 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06863 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10928 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27017 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G067500.1 UPL2, Ceric.10G067500 E3 ubiquitin ligase *(UPL1) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G011900.1 UPL1, Ceric.29G011900 E3 ubiquitin ligase *(UPL1) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g04957 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009206001 UPL2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
MA_20049g0010 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Pir_g20483 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57729 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02429 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06511 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003603 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=387-11411 0.02 OrthoFinder output from all 47 species
Zm00001e009321_P001 UPL1, Zm00001e009321 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR010309 E3_Ub_ligase_DUF908 32 125
IPR010309 E3_Ub_ligase_DUF908 164 228
No external refs found!