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  5. Spa_g27908

Spa_g27908


Description : not classified & original description: none


Gene families : OG0000627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g27908

Target Alias Description ECC score Gene Family Method Actions
AT3G63450 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g087894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04338.t2 Aspi01Gene04338 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0037.g026036 No alias not classified & original description: CDS=1-2112 0.02 OrthoFinder output from all 47 species
Cba_g31898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G049200.1 Ceric.26G049200 not classified & original description: pacid=50600373... 0.02 OrthoFinder output from all 47 species
Dcu_g51304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030048001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
GSVIVT01031538001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
GSVIVT01037782001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
LOC_Os03g21160.2 LOC_Os03g21160 C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Pir_g44098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g54278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038256_P001 Zm00001e038256 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 206 226
No external refs found!