Spa_g27636


Description : not classified & original description: none


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g27636

Target Alias Description ECC score Gene Family Method Actions
AT5G47780 GAUT4 galacturonosyltransferase 4 0.04 OrthoFinder output from all 47 species
Aev_g01406 GAUT13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07277 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Aev_g09997 GAUT11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19549 LGT4, GAUT10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14467 GAUT8, QUA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14763 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Als_g33755 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Als_g38542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29828 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Aop_g62565 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Aspi01Gene02010.t1 GAUT8, QUA1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32201.t1 LGT1, GAUT1,... component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38504.t1 LGT4, GAUT10,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56903.t1 LGT1, GAUT1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60614.t1 GAUT8, QUA1,... glycosyltransferase (QUA1) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Aspi01Gene67868.t1 GAUT8, QUA1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11306 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Cba_g13854 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.05 OrthoFinder output from all 47 species
Ceric.39G059100.1 GAUT13, Ceric.39G059100 not classified & original description: pacid=50582378... 0.02 OrthoFinder output from all 47 species
Dcu_g12664 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.05 OrthoFinder output from all 47 species
Dcu_g14771 LGT4, GAUT10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34317 GAUT13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21436 GAUT9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008143001 GAUT11 Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01036507001 GAUT9 Probable galacturonosyltransferase 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_06306 GAUT8, QUA1 Galacturonosyltransferase 8 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_12736 LGT1, GAUT1 component GAUT1 of GAUT1:GAUT7 galacturonosyltransferase complex 0.05 OrthoFinder output from all 47 species
Gb_31044 GAUT13 Probable galacturonosyltransferase 14 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_33416 GAUT13 Probable galacturonosyltransferase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g02918 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Len_g21257 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30128 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
MA_118216g0010 GAUT7, LGT7 component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.06 OrthoFinder output from all 47 species
MA_14268g0010 GAUT13 Probable galacturonosyltransferase 14 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g07895 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Nbi_g02277 GAUT8, QUA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20308 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Pir_g13569 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Ppi_g01202 GAUT9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33129 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005216 LGT1, GAUT1 not classified & original description: CDS=1-1323 0.02 OrthoFinder output from all 47 species
Sam_g12267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g083310.3.1 GAUT8, QUA1,... Galacturonosyltransferase 8 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g055930.3.1 GAUT15, Solyc07g055930 Probable galacturonosyltransferase 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g064050.3.1 LGT6, GAUT12,... Probable galacturonosyltransferase 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc10g006500.4.1 LGT6, GAUT12,... Probable galacturonosyltransferase 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g04446 GAUT9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26146 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Spa_g30980 LGT1, GAUT1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e014594_P001 GAUT8, QUA1,... Galacturonosyltransferase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e021546_P001 GAUT4, Zm00001e021546 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!