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  5. Spa_g27475

Spa_g27475


Description : not classified & original description: none


Gene families : OG0016913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016913_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g27475
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
Aop_g03188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g18173 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42301 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32981 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37854 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 357 403
IPR002885 Pentatricopeptide_repeat 458 505
IPR002885 Pentatricopeptide_repeat 254 302
IPR002885 Pentatricopeptide_repeat 562 607
IPR002885 Pentatricopeptide_repeat 155 183
IPR002885 Pentatricopeptide_repeat 331 354
IPR002885 Pentatricopeptide_repeat 637 658
IPR046848 E_motif 679 727
No external refs found!