Spa_g26885


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26885

Target Alias Description ECC score Gene Family Method Actions
AT2G05230 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
AT2G05250 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g079764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26234.t1 Aspi01Gene26234 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.05 OrthoFinder output from all 47 species
Dcu_g04874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017824001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01028708001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01030061001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_17193 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g31940.1 LOC_Os04g31940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34440.1 LOC_Os06g34440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g01381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_96489g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g07614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g098250.4.1 Solyc01g098250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g007280.4.1 Solyc03g007280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g07672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025632_P001 Zm00001e025632 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e025633_P001 Zm00001e025633 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e040755_P001 Zm00001e040755 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e041002_P001 Zm00001e041002 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 67 128
IPR024593 DUF3444 803 1001
No external refs found!