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  5. Spa_g26774

Spa_g26774


Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26774

Target Alias Description ECC score Gene Family Method Actions
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 OrthoFinder output from all 47 species
Adi_g017299 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09198 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11705 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G019000.1 HYP1, ATHYP1,... calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z193300.1 Ceric.1Z193300 not classified & original description: pacid=50634950... 0.04 OrthoFinder output from all 47 species
Ehy_g15661 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g51630.1 LOC_Os05g51630 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os07g05570.1 ERD4, LOC_Os07g05570 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
Mp7g04480.1 No alias calcium-permeable channel (OSCA) 0.05 OrthoFinder output from all 47 species
Msp_g15893 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002499_P001 Zm00001e002499 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 379 650
IPR027815 CSC1/OSCA1-like_cyt 206 368
IPR032880 Csc1/OSCA1-like_N 16 185
No external refs found!