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  5. Spa_g26694

Spa_g26694 (FCA)


Aliases : FCA

Description : transcription factor *(FCA/SSF) & original description: none


Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26694

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00168380 FCA,... Flowering time control protein FCA OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g32791 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28529 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0314.g064239 FCA transcription factor *(FCA/SSF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G023200.1 FCA, Ceric.04G023200 transcription factor *(FCA/SSF) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G007400.1 FCA, Ceric.14G007400 transcription factor *(FCA/SSF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G065300.1 RBP-DR1,... not classified & original description: pacid=50575797... 0.04 OrthoFinder output from all 47 species
Dac_g03249 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43236 FCA transcription factor *(FCA/SSF) & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g03762 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09993 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034966001 FCA Flowering time control protein FCA OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00863 FCA no description available(sp|b8bcz8|fca_orysi : 290.0) 0.06 OrthoFinder output from all 47 species
Gb_05124 FCA no description available(sp|b8bcz8|fca_orysi : 224.0) 0.06 OrthoFinder output from all 47 species
LOC_Os09g03610.1 FCA, LOC_Os09g03610 no description available(sp|q6k271|fca_orysj : 775.0) 0.06 OrthoFinder output from all 47 species
Len_g09308 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22611 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06188 FCA transcription factor *(FCA/SSF) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g17218 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_114047g0010 FCA Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_5779g0010 FCA Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp7g15600.1 FCA Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g08750 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44791 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26456 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08240 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31456 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g058450.3.1 FCA, Solyc01g058450 Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g20389 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009433_P002 FCA, Zm00001e009433 no description available(sp|b8bcz8|fca_orysi : 625.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 168 230
IPR000504 RRM_dom 77 139
IPR001202 WW_dom 578 604
No external refs found!