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  5. Spa_g26507

Spa_g26507 (TPL, WSIP1)


Aliases : TPL, WSIP1

Description : transcriptional co-repressor *(TPL/TPR) & original description: none


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26507

Target Alias Description ECC score Gene Family Method Actions
Adi_g066586 TPR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34066 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Als_g43720 TPL, WSIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17933 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aop_g06966 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10285.t2 TPR1, Aspi01Gene10285 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G073000.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06480.1 TPR1, LOC_Os08g06480 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
MA_97574g0010 TPR2 Protein TPR2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Msp_g38873 TPR3 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc07g008040.4.1 WSIP2, TPR4,... transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Solyc08g029050.4.1 TPR1, Solyc08g029050 Protein TPR2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 927 960
IPR001680 WD40_repeat 456 490
No external refs found!