AMTR_s00098p00154060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00098.43

Description : Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.PnsL3/PQL2 component


Gene families : OG_01_0001933 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001933_tree ,
OG_02_0009073 (LandPlants) Phylogenetic Tree(s): OG_02_0009073_tree ,
OG_03_0006241 (SeedPlants) Phylogenetic Tree(s): OG_03_0006241_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00098p00154060
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT3G01440 PQL1, PQL2 PsbQ-like 1 0.07 Archaeplastida
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.11 Archaeplastida
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.19 Archaeplastida
Cre08.g372450 No alias Oxygen-evolving enhancer protein 3, chloroplastic... 0.06 Archaeplastida
GSVIVT01002809001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.13 Archaeplastida
GSVIVT01014586001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 Archaeplastida
Gb_04734 No alias component PsbQ of PS-II oxygen-evolving center 0.05 Archaeplastida
LOC_Os04g44200.1 No alias PsbQ-like protein 3, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os07g01480.1 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.07 Archaeplastida
LOC_Os07g36080.1 No alias component PsbQ of PS-II oxygen-evolving center 0.11 Archaeplastida
MA_218996g0010 No alias component PsbQ of PS-II oxygen-evolving center 0.05 Archaeplastida
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.15 Archaeplastida
Pp3c13_6570V3.1 No alias photosystem II subunit QA 0.09 Archaeplastida
Pp3c3_2620V3.1 No alias photosystem II subunit QA 0.14 Archaeplastida
Pp3c5_4110V3.1 No alias photosystem II subunit QA 0.08 Archaeplastida
Smo106248 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.02 Archaeplastida
Solyc02g079950.3.1 No alias component PsbQ of PS-II oxygen-evolving center 0.2 Archaeplastida
Solyc10g006530.4.1 No alias Photosynthetic NDH subunit of lumenal location 3,... 0.05 Archaeplastida
Zm00001e007556_P001 No alias PsbQ-like protein 3, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e010513_P001 No alias component PsbQ of PS-II oxygen-evolving center 0.16 Archaeplastida
Zm00001e032657_P001 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.08 Archaeplastida
Zm00001e035180_P001 No alias no hits & (original description: none) 0.14 Archaeplastida
AT3G01440 PQL1, PQL2 PsbQ-like 1 0.05 LandPlants
GSVIVT01014586001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.06 LandPlants
LOC_Os07g01480.1 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.07 LandPlants
Solyc10g006530.4.1 No alias Photosynthetic NDH subunit of lumenal location 3,... 0.04 LandPlants
Zm00001e032657_P001 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.08 LandPlants
AT3G01440 PQL1, PQL2 PsbQ-like 1 0.05 SeedPlants
GSVIVT01014586001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.06 SeedPlants
LOC_Os07g01480.1 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.07 SeedPlants
Solyc10g006530.4.1 No alias Photosynthetic NDH subunit of lumenal location 3,... 0.03 SeedPlants
Zm00001e032657_P001 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008797 PSII_PsbQ 30 220
No external refs found!