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  5. Spa_g26277

Spa_g26277


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26277

Target Alias Description ECC score Gene Family Method Actions
Ala_g08655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G086800.1 Ceric.11G086800 not classified & original description: pacid=50595981... 0.03 OrthoFinder output from all 47 species
Dcu_g06314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_16979 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g10695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g42383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g42385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g048030.4.1 Solyc07g048030 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 279 344
IPR000504 RRM_dom 179 241
No external refs found!