- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CIB1
Description : regulatory protein (CIB) of blue light perception & original description: none
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G26260 | CIB5 | cryptochrome-interacting basic-helix-loop-helix 5 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G01305 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g041743 | LRL2 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g112806 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03333 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06285 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g26066 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g09007 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g22777 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g49595 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g21168 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g25678 | BEE2 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g35502 | HEC2 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene13223.t1 | HEC1, Aspi01Gene13223 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene14949.t1 | LRL3, Aspi01Gene14949 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene28550.t1 | CIB1, Aspi01Gene28550 | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene32585.t1 | LRL3, Aspi01Gene32585 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene54818.t2 | RSL2, Aspi01Gene54818 | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene60934.t1 | PIF3, POC1,... | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene63646.t1 | LRL3, Aspi01Gene63646 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042718 | RSL2 | bHLH-type transcription factor & original description:... | 0.1 | OrthoFinder output from all 47 species | |
| Cba_g70482 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G045500.1 | Ceric.04G045500 | bHLH-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.04G097400.1 | HEC1, Ceric.04G097400 | bHLH-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.22G074300.1 | Ceric.22G074300 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09865 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g32598 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g17261 | HEC2 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25483 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g29020 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02749 | PIL5, PIF1 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05786 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18802 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g21461 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26651 | PIL5, PIF1 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Gb_27869 | HEC1 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_30839 | RHD6 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g61480.1 | LOC_Os01g61480 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06729 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g26119 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_306658g0010 | No alias | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g14891 | BPEp, ZCW32, BPE, BPEub | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g00901 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g06619 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g34122 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g03791 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29684 | HEC2 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62088 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006090 | No alias | bHLH-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g011925 | HEC2 | bHLH-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0237.g026567 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g14538 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g48191 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Smo405220 | HEC1 | RNA biosynthesis.transcriptional activation.bHLH... | 0.14 | OrthoFinder output from all 47 species | |
| Solyc06g069600.3.1 | UNE10, Solyc06g069600 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g043580.4.1 | PIL6, PIF5,... | transcription factor (bHLH). PIF red/far-red light... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g38143 | ATRSL1, RSL1 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g41478 | RSL2 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02037 | LRL3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g08898 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g10076 | BPEp, ZCW32, BPE, BPEub | regulatory protein (CIB) of blue light perception &... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e019392_P001 | Zm00001e019392 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e021883_P001 | HEC3, Zm00001e021883 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 222 | 269 |
| No external refs found! |