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  5. Spa_g26195

Spa_g26195


Description : not classified & original description: none


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26195

Target Alias Description ECC score Gene Family Method Actions
Adi_g100776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38622.t1 Aspi01Gene38622 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38637.t1 Aspi01Gene38637 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g62281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021179.32 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g31555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008524001 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
Nbi_g08137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011359_P005 Zm00001e011359 ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
Zm00001e021043_P002 Zm00001e021043 ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 351 387
IPR003959 ATPase_AAA_core 198 327
No external refs found!