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  5. Spa_g26114

Spa_g26114


Description : putative silicon efflux transporter *(LSI2) & original description: none


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00063100 evm_27.TU.AmTr_v1... Silicon efflux transporter LSI3 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Adi_g056338 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Adi_g056339 No alias putative silicon efflux transporter *(LSI2) & original... 0.01 OrthoFinder output from all 47 species
Als_g27735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43332.t1 Aspi01Gene43332 putative silicon efflux transporter *(LSI2) & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g007694 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Dac_g39943 No alias putative silicon efflux transporter *(LSI2) & original... 0.05 OrthoFinder output from all 47 species
Dac_g39944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10667 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Spa_g11339 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g47300 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species
Zm00001e002282_P001 Zm00001e002282 putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 1 423
No external refs found!