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  5. Spa_g25851

Spa_g25851


Description : not classified & original description: none


Gene families : OG0003321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25851

Target Alias Description ECC score Gene Family Method Actions
Adi_g080721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22460 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0327.g065237 No alias not classified & original description: CDS=1-5397 0.04 OrthoFinder output from all 47 species
Cba_g36151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z176700.1 Ceric.1Z176700 not classified & original description: pacid=50637339... 0.04 OrthoFinder output from all 47 species
Ceric.1Z194000.1 Ceric.1Z194000 not classified & original description: pacid=50618972... 0.04 OrthoFinder output from all 47 species
Dcu_g04153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008079001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os03g06950.1 LOC_Os03g06950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g49533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13760 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g071120.3.1 Solyc06g071120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039017_P003 Zm00001e039017 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 1412 1740
IPR006866 DUF627_N 98 204
IPR006865 DUF629 364 926
No external refs found!