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  5. Spa_g25497

Spa_g25497


Description : deubiquitinase *(OTU3-4) & original description: none


Gene families : OG0007365 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007365_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25497

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene37691.t1 Aspi01Gene37691 deubiquitinase *(OTU3-4) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g15930.2 LOC_Os03g15930 deubiquitinase (OTU3-4) 0.02 OrthoFinder output from all 47 species
Nbi_g00521 No alias deubiquitinase *(OTU3-4) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10245 No alias deubiquitinase *(OTU3-4) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001172_P001 Zm00001e001172 deubiquitinase (OTU3-4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 131 236
No external refs found!