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  5. Spa_g25195

Spa_g25195 (ROL5)


Aliases : ROL5

Description : component *(CTU1) of CTU1-CTU2 tRNA thiouridylase complex & original description: none


Gene families : OG0005677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00247720 ROL5,... RNA processing.RNA modification.thiolation.CTU1-URM1... 0.03 OrthoFinder output from all 47 species
Ppi_g18328 ROL5 component *(CTU1) of CTU1-CTU2 tRNA thiouridylase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032442 CTU1_C 281 310
IPR011063 TilS/TtcA_N 53 240
No external refs found!