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  5. Spa_g25087

Spa_g25087 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25087
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00138540 LOP1, TRN1,... Protein TORNADO 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aev_g39267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11130 LOP1, TRN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g35639 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17165 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G043500.1 LOP1, TRN1,... not classified & original description: pacid=50566189... 0.04 OrthoFinder output from all 47 species
Dac_g10563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14654 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20243 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21708 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39298 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17501 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g52046 LOP1, TRN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp4g08770.1 No alias Protein TORNADO 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g32964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20985 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005696_P001 LOP1, TRN1,... Protein TORNADO 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!