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  5. Spa_g25074

Spa_g25074


Description : component *(U1C) of U1 snRNP complex & original description: none


Gene families : OG0002867 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002867_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25074

Target Alias Description ECC score Gene Family Method Actions
AT4G03120 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
MA_27014g0010 No alias component U1C of U1 small nuclear ribonucleoprotein... 0.04 OrthoFinder output from all 47 species
Mp4g05150.1 No alias component U1C of U1 small nuclear ribonucleoprotein... 0.02 OrthoFinder output from all 47 species
Pir_g02748 No alias component *(U1C) of U1 snRNP complex & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013085 U1-CZ_Znf_C2H2 63 100
No external refs found!