Spa_g25050


Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000309 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25050
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Ala_g11886 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Ala_g18322 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 39 species
Als_g03478 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Als_g38436 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Aop_g02318 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Aop_g10541 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 39 species
Aspi01Gene72593.t1 Aspi01Gene72593 component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Azfi_s0003.g007793 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Azfi_s0005.g009357 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Ceric.08G045600.1 Ceric.08G045600 component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ceric.26G014800.1 Ceric.26G014800 component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Dac_g04863 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Dac_g14500 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Dcu_g18517 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Dcu_g50261 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 39 species
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 39 species
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 39 species
Gb_08874 No alias component RPL22 of LSU proteome component 0.03 OrthoFinder output from all 39 species
Gb_36164 No alias component RPL22 of LSU proteome component 0.04 OrthoFinder output from all 39 species
Len_g02481 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Lfl_g27083 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Msp_g03306 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Msp_g20028 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g07171 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ore_g19866 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ore_g36770 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pir_g40025 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 39 species
Pp3c11_630V3.1 Pp3c11_630 Ribosomal L22e protein family 0.03 OrthoFinder output from all 39 species
Pp3c11_680V3.1 Pp3c11_680 Ribosomal L22e protein family 0.01 OrthoFinder output from all 39 species
Pp3c1_120V3.1 Pp3c1_120 Ribosomal L22e protein family 0.02 OrthoFinder output from all 39 species
Pp3c2_28500V3.1 Pp3c2_28500 Ribosomal L22e protein family 0.02 OrthoFinder output from all 39 species
Pp3c2_28510V3.1 Pp3c2_28510 Ribosomal L22e protein family 0.02 OrthoFinder output from all 39 species
Pp3c7_27030V3.1 Pp3c7_27030 Ribosomal L22e protein family 0.02 OrthoFinder output from all 39 species
Sacu_v1.1_s0167.g024206 AGL26 component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Sacu_v1.1_s0197.g025519 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Spa_g14668 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Tin_g36488 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 44 153
No external refs found!