Spa_g24450


Description : not classified & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g24450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT2G28160 ATBHLH029,... FER-like regulator of iron uptake 0.02 OrthoFinder output from all 47 species
Aop_g05844 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36020 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08716.t1 Aspi01Gene08716 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.02G053900.1 Ceric.02G053900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g13552 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029311001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
Gb_26391 ATBHLH029,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g23550.1 LOC_Os04g23550 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_126263g0010 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_28638g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_387150g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_666536g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_780853g0010 ATBHLH029,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_86748g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9270965g0010 SCRM2, ICE2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g06243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32399 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g07324 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g014590.3.1 Solyc05g014590 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.03 OrthoFinder output from all 47 species
Spa_g09017 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10079 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29801 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008393_P001 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.03 OrthoFinder output from all 47 species
Zm00001e040186_P002 Zm00001e040186 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e040675_P003 Zm00001e040675 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e040732_P001 ATBHLH029,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!