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  5. Spa_g24307

Spa_g24307 (ATGLR3.1, GLR2, GLR3.1, ATGLR2)


Aliases : ATGLR3.1, GLR2, GLR3.1, ATGLR2

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g24307

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00050250 GLUR3, GLR3.4,... Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
Aev_g42283 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35306 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38137 ATGLR3.2,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10462 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29241 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49370.t1 ATGLR3.5, GLR6,... ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65110.t2 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G048200.1 GLR3.3,... ligand-gated cation channel *(GLR) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01030602001 GLUR3, GLR3.4, ATGLR3.4 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
Gb_19409 GLR2.7, ATGLR2.7 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
LOC_Os02g02540.1 GLR3.3,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Len_g00747 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.07 OrthoFinder output from all 47 species
MA_10429132g0020 No alias ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Msp_g12407 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12384 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15142 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32327 ATGLR3.2,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30122 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g62643 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005895 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018590 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025676 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original... 0.02 OrthoFinder output from all 47 species
Spa_g24701 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31865 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 15 68
No external refs found!