Zm00001d043548 (GRMZM2G078756)


Aliases : GRMZM2G078756

Description : 29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase class IIc family protein


Gene families : OG_01_0006188 (Gene family) Phylogenetic Tree(s): OG0006188_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d043548
Cluster HCCA cluster: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT3G58140 No alias phenylalanyl-tRNA synthetase class IIc family protein 0.03 Gene family
Cpa|evm.model.tig00020930.14 No alias 29.1.20 protein.aa activation.phenylalanine-tRNA ligase... 0.02 Gene family
Cre02.g079600 No alias 29.1.20 protein.aa activation.phenylalanine-tRNA ligase... 0.07 Gene family
GSVIVT01010923001 No alias 29.1.20 protein.aa activation.phenylalanine-tRNA ligase... 0.03 Gene family
MA_12107g0010 No alias 29.1.20 protein.aa activation.phenylalanine-tRNA ligase... 0.03 Gene family
Smo165421 PACid_15413457 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0043039 tRNA aminoacylation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002319 Phenylalanyl-tRNA_Synthase 135 344
IPR005121 Fdx_antiC-bd 357 447
No external refs found!