Spa_g23958


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g23958

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Adi_g005655 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013701 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022043 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g066620 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27648 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37181 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g02232 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04126 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g05729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16817 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21870 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23926 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23952 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26164 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29767 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31824 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67868 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68092 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68112 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g70076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67745 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G059000.1 Ceric.04G059000 not classified & original description: pacid=50632212... 0.05 OrthoFinder output from all 47 species
Ceric.25G047500.1 Ceric.25G047500 not classified & original description: pacid=50594463... 0.07 OrthoFinder output from all 47 species
Ceric.26G072000.1 Ceric.26G072000 not classified & original description: pacid=50599752... 0.04 OrthoFinder output from all 47 species
Ceric.27G069000.1 Ceric.27G069000 not classified & original description: pacid=50605685... 0.04 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Len_g31725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33029 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_75512g0010 DOT4 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g04397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g08826 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g25833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28352 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30376 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31719 LOI1, MEF11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45774 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05374 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10358 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10571 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13987 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38695 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g39319 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30304 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03998 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35237 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 215 239
IPR002885 Pentatricopeptide_repeat 138 185
IPR002885 Pentatricopeptide_repeat 36 83
IPR002885 Pentatricopeptide_repeat 240 287
No external refs found!