Spa_g23792

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g23792
Cluster	HCCA: Cluster_190

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00153440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00036p00232310	ADOF2, DOF2,...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AT1G28310	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
Adi_g078152	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g06704	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18959.t1	ADOF1, DOF1,...	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g76223	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
LOC_Os01g17000.1	CDF2, LOC_Os01g17000	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
MA_459791g0010	TMO6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
MA_74014g0010	No alias	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Ore_g26476	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g41458	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g10327	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g26540	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g11469	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517	CDF3	transcription factor *(DOF) & original description: CDS=154-1659	0.03	OrthoFinder output from all 47 species
Sam_g26799	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g090220.3.1	OBP1, Solyc02g090220	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc08g082910.2.1	Solyc08g082910	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e041944_P001	Zm00001e041944	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	1	43

External Links

No external refs found!

Spa_g23792

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation