1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g23739

Spa_g23739 (GID1B, ATGID1B)


Aliases : GID1B, ATGID1B

Description : not classified & original description: none


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g23739

Target Alias Description ECC score Gene Family Method Actions
Ala_g13469 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g31569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22903 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43480 CXE17, AtCXE17 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05199 CXE13, ATCXE13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09231.t1 CXE13, ATCXE13,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene15776.t1 Aspi01Gene15776 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene17857.t1 Aspi01Gene17857 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene31612.t1 CXE17, AtCXE17,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31614.t1 CXE17, AtCXE17,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31615.t1 CXE17, AtCXE17,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31616.t1 CXE17, AtCXE17,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40335.t1 CXE17, AtCXE17,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0159.g053927 CXE17, AtCXE17 not classified & original description: CDS=1-1131 0.06 OrthoFinder output from all 47 species
Cba_g11776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G006300.1 CXE17, AtCXE17,... not classified & original description: pacid=50633795... 0.02 OrthoFinder output from all 47 species
Ceric.1Z084300.1 CXE17, AtCXE17,... not classified & original description: pacid=50637264... 0.02 OrthoFinder output from all 47 species
Ceric.36G031400.1 Ceric.36G031400 not classified & original description: pacid=50568384... 0.01 OrthoFinder output from all 47 species
Ceric.36G031500.1 CXE17, AtCXE17,... not classified & original description: pacid=50568436... 0.02 OrthoFinder output from all 47 species
Ceric.36G031600.1 Ceric.36G031600 not classified & original description: pacid=50568872... 0.04 OrthoFinder output from all 47 species
Ceric.36G031700.1 CXE17, AtCXE17,... not classified & original description: pacid=50568868... 0.01 OrthoFinder output from all 47 species
Ceric.37G015700.1 CXE17, AtCXE17,... not classified & original description: pacid=50616322... 0.02 OrthoFinder output from all 47 species
Dac_g01482 ATCXE12, CXE12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11368 CXE17, AtCXE17 not classified & original description: none 0.2 OrthoFinder output from all 47 species
Gb_30372 No alias Probable carboxylesterase 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g34240.1 LOC_Os07g34240 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza... 0.06 OrthoFinder output from all 47 species
Len_g29270 AtCXE18, CXE18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20050.1 ATGID1C, GID1C Gibberellin receptor GID1C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g05346 CXE13, ATCXE13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08336 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g17135 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g36374 ATGID1C, GID1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30292 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15651 CXE17, AtCXE17 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017680 CXE20, AtCXE20 not classified & original description: CDS=1-990 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0275.g027054 AtCXE18, CXE18 not classified & original description: CDS=649-1746 0.02 OrthoFinder output from all 47 species
Spa_g21052 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 11 101
No external refs found!