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  5. Spa_g23137

Spa_g23137 (ATCRSH, CRSH)


Aliases : ATCRSH, CRSH

Description : ppGpp synthetase *(CRSH) & original description: none


Gene families : OG0003616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g23137
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Aob_g16932 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G071200.1 Ceric.30G071200 not classified & original description: pacid=50608643... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.103 No alias Probable GTP diphosphokinase CRSH3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g36475 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10383 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g50135 No alias ppGpp synthetase *(CRSH) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031121_P001 ATCRSH, CRSH,... Probable GTP diphosphokinase CRSH1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 558 683
IPR002048 EF_hand_dom 728 781
No external refs found!