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  5. Spa_g22789

Spa_g22789 (4CL3)


Aliases : 4CL3

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22789
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G65060 4CL3 4-coumarate:CoA ligase 3 0.02 OrthoFinder output from all 47 species
AT3G21230 4CL5 4-coumarate:CoA ligase 5 0.02 OrthoFinder output from all 47 species
Als_g32388 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g03284 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aop_g12693 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46333.t1 4CL3, Aspi01Gene46333 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046013 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01024400001 4CL3 4-coumarate--CoA ligase 2 OS=Glycine max 0.03 OrthoFinder output from all 47 species
GSVIVT01029182001 4CL1, AT4CL1, 4CL.1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
MA_109119g0010 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Mp5g01200.1 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Nbi_g03050 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Ppi_g08302 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Smo177393 AT4CL2, 4CL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
Zm00001e004061_P001 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 510 586
IPR000873 AMP-dep_Synth/Lig_com 32 501
No external refs found!