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  5. Spa_g22744

Spa_g22744 (PFC1)


Aliases : PFC1

Description : rRNA adenosine dimethylase *(PFC) & original description: none


Gene families : OG0006692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22744
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00137360 PFC1,... RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
Adi_g006669 PFC1 rRNA adenosine dimethylase *(PFC) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g20981 PFC1 rRNA adenosine dimethylase *(PFC) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 76 345
No external refs found!