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  5. Spa_g22742

Spa_g22742


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22742

Target Alias Description ECC score Gene Family Method Actions
Adi_g021084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077328 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16418 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043186 No alias not classified & original description: CDS=1-3252 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0254.g060427 No alias not classified & original description: CDS=1-2130 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07618 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G007100.1 Ceric.23G007100 not classified & original description: pacid=50611480... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g10610 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22449 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05005 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g61344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009977 No alias not classified & original description: CDS=1-2472 0.04 OrthoFinder output from all 47 species
Spa_g01164 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16921 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34089 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 366 413
IPR002885 Pentatricopeptide_repeat 247 293
IPR002885 Pentatricopeptide_repeat 146 192
IPR002885 Pentatricopeptide_repeat 221 244
IPR002885 Pentatricopeptide_repeat 622 648
IPR002885 Pentatricopeptide_repeat 458 484
IPR002885 Pentatricopeptide_repeat 486 515
IPR002885 Pentatricopeptide_repeat 660 683
No external refs found!