Spa_g22537

Description : platform ATPase CDC48 & original description: none

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g22537

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00085p00052820	CDC48A, CDC48,...	Cell division cycle protein 48 homolog OS=Glycine max	0.03	OrthoFinder output from all 47 species
AT3G09840	CDC48A, CDC48, ATCDC48	cell division cycle 48	0.03	OrthoFinder output from all 47 species
AT3G53230	No alias	ATPase, AAA-type, CDC48 protein	0.03	OrthoFinder output from all 47 species
AT5G03340	No alias	ATPase, AAA-type, CDC48 protein	0.03	OrthoFinder output from all 47 species
Azfi_s0011.g012482	No alias	platform ATPase CDC48 & original description: CDS=1-2658	0.03	OrthoFinder output from all 47 species
LOC_Os08g31870.1	LOC_Os08g31870	platform ATPase (CDC48)	0.02	OrthoFinder output from all 47 species
Mp1g02450.1	No alias	platform ATPase (CDC48)	0.02	OrthoFinder output from all 47 species
Pnu_g00760	CDC48B	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c12_11370V3.1	Pp3c12_11370	AAA-type ATPase family protein	0.01	OrthoFinder output from all 47 species
Solyc10g084050.2.1	Solyc10g084050	platform ATPase (CDC48)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	677	718
IPR041569	AAA_lid_3	401	443
IPR003959	ATPase_AAA_core	522	655
IPR003959	ATPase_AAA_core	249	378
IPR003338	CDC4_N-term_subdom	34	115
IPR015415	Vps4_C	727	768
IPR004201	Cdc48_dom2	136	198

External Links

No external refs found!