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  5. Spa_g22327

Spa_g22327 (RH8, ATRH8)


Aliases : RH8, ATRH8

Description : DDX6-type mRNA helicase *(RH12/RH8) & original description: none


Gene families : OG0001822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001822_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22327

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01026866001 RH8, ATRH8 DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 94 257
IPR001650 Helicase_C 295 401
No external refs found!