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  5. Spa_g22304

Spa_g22304 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22304
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00237390 AtTLP1, TLP1,... RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
AT1G53320 AtTLP7, TLP7 tubby like protein 7 0.01 OrthoFinder output from all 47 species
Adi_g056850 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080078 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g126997 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37612 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08876 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10994.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g78284 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08196 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10365 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06633 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02552 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04759 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06630.2 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Lfl_g01802 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_132704g0010 AtTLP3, TLP3 transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Ore_g09550 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51111 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25415 No alias TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19092 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 60 106
IPR000007 Tubby_C 152 441
No external refs found!