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  5. Spa_g22206

Spa_g22206 (SDG30, ATX2)


Aliases : SDG30, ATX2

Description : not classified & original description: none


Gene families : OG0006147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22206

Target Alias Description ECC score Gene Family Method Actions
Ala_g37430 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29506 ATX4, SDG16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0215.g058370 SDG30, ATX2 not classified & original description: CDS=559-6048 0.07 OrthoFinder output from all 47 species
Cba_g73011 ATX3, SDG14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_26322 SET29, SDG29, ATX5 Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10436998g0010 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10436998g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g26800.1 SDG30, ATX2 Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g15718 SDG30, ATX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20520 ATX4, SDG16 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1857 1964
IPR032308 TDBD 249 296
No external refs found!