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  5. Spa_g21973

Spa_g21973 (EMB2780)


Aliases : EMB2780

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g21973
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00241740 EMB2780,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70665.t1 EMB2780, Aspi01Gene70665 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011315 ATREV3, REV3 not classified & original description: CDS=841-2013 0.02 OrthoFinder output from all 47 species
Sam_g25356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g081250.3.1 EMB2780, Solyc10g081250 component POLD1 of DNA polymerase delta complex 0.02 OrthoFinder output from all 47 species
Tin_g11079 EMB2780 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 120 463
IPR025687 Znf-C4pol 997 1068
IPR006134 DNA-dir_DNA_pol_B_multi_dom 527 960
No external refs found!