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  5. Spa_g21846

Spa_g21846


Description : circadian clock factor *(REVEILLE) & original description: none


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g21846

Target Alias Description ECC score Gene Family Method Actions
AT5G52660 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g088112 RVE1 transcription factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07955 RVE1 transcription factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35636 No alias transcription factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26758 No alias circadian clock factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62177 RVE1 transcription factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16812.t1 Aspi01Gene16812 transcription factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58319.t1 RVE1, Aspi01Gene58319 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g008971 RVE1 transcription factor *(REVEILLE) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0042.g026930 CCA1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035858 RVE1 transcription factor *(REVEILLE) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g03026 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24529 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z100700.1 Ceric.1Z100700 circadian clock factor *(REVEILLE) & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z302400.1 Ceric.1Z302400 transcription factor *(REVEILLE) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g11557 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33064 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18608 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16695 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25658 RVE1 transcription factor (MYB-related). circadian clock core... 0.03 OrthoFinder output from all 47 species
LOC_Os05g07010.1 LOC_Os05g07010 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Len_g20787 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g51970 RVE1 transcription factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29515 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014166 RVE2, CIR1 transcription factor *(REVEILLE) & original description:... 0.03 OrthoFinder output from all 47 species
Spa_g38631 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 30 75
No external refs found!