Aliases : PKL, GYM, CHR6, SSL2, CHD3
Description : CHD3-type chromatin remodeling factor *(PKL/PKR) & original description: none
Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00245560 | ATCHR12,... | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00071p00058700 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00086p00165640 | PKL, GYM, CHR6,... | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00090p00148990 | SYD, CHR3,... | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00111p00031560 | No alias | Chromatin organisation.chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
AT2G13370 | CHR5 | chromatin remodeling 5 | 0.02 | OrthoFinder output from all 47 species | |
AT2G25170 | PKL, GYM, CHR6,... | chromatin remodeling factor CHD3 (PICKLE) | 0.03 | OrthoFinder output from all 47 species | |
AT2G28290 | SYD, CHR3 | P-loop containing nucleoside triphosphate hydrolases... | 0.03 | OrthoFinder output from all 47 species | |
AT3G06010 | ATCHR12 | Homeotic gene regulator | 0.05 | OrthoFinder output from all 47 species | |
AT5G44800 | PKR1, CHR4 | chromatin remodeling 4 | 0.05 | OrthoFinder output from all 47 species | |
Adi_g061147 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g078005 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g104730 | PKL, GYM, CHR6,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g03411 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g09087 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g02726 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g11507 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g12634 | PKL, GYM, CHR6,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ala_g17670 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.06 | OrthoFinder output from all 47 species | |
Ala_g27421 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g01984 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g05142 | PKL, GYM, CHR6,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g16436 | No alias | chromatin remodeling factor *(ALC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g16533 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g22693 | CHR17 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.03 | OrthoFinder output from all 47 species | |
Als_g56902 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
Aob_g29249 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g25745 | CHR17 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0129.g048917 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.06G006600.1 | ATCHR12, Ceric.06G006600 | SMARCA component *(SYD/BRM/MINU) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.10G020300.1 | CHR5, Ceric.10G020300 | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.1Z205000.1 | PKR1, CHR4,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.21G025000.1 | CHR11, Ceric.21G025000 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.36G015700.1 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000350.9 | PKR2 | CHD3-type chromatin-remodeling factor PICKLE... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000802.67 | ATCHR12 | Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020960.24 | CHR5 | Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Cre03.g158550 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g179300 | CHR5 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g508150 | CHR11 | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g647602 | CHR01, CHR1,... | ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Dac_g15532 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g02069 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g03207 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g03216 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g05806 | CHR11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g19159 | CHR11 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g42511 | PKL, GYM, CHR6,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g09827 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Dde_g15247 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07066 | ATCHR12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012117001 | PKR1, CHR4 | RNA biosynthesis.transcriptional activation.PHD finger... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017791001 | CHR17 | Chromatin organisation.chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01017921001 | ATCHR12 | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037235001 | CHR5 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
Gb_16961 | PKR1, CHR4 | chromatin remodeling factor (Chd3/Mi-2) | 0.04 | OrthoFinder output from all 47 species | |
Gb_27153 | ATCHR12 | chromatin remodeling factor (Snf2) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g08480.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.05 | OrthoFinder output from all 47 species | |
Len_g01407 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.06 | OrthoFinder output from all 47 species | |
Len_g08675 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
Len_g29294 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
Len_g50266 | CHR11 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g06769 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g16058 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g28014 | PKL, GYM, CHR6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_102992g0020 | CHR11 | Probable chromatin-remodeling complex ATPase chain... | 0.02 | OrthoFinder output from all 47 species | |
MA_10430012g0010 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.04 | OrthoFinder output from all 47 species | |
MA_141135g0010 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g18560.1 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder output from all 47 species | |
Mp2g26680.1 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.05 | OrthoFinder output from all 47 species | |
Mp3g15030.1 | CHR17 | chromatin remodeling factor (Iswi) | 0.03 | OrthoFinder output from all 47 species | |
Mp4g00040.1 | PKR1, CHR4 | chromatin remodeling factor (Chd3/Mi-2) | 0.03 | OrthoFinder output from all 47 species | |
Mp5g24460.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.02 | OrthoFinder output from all 47 species | |
Mp8g17660.1 | ATCHR12 | chromatin remodeling factor (Snf2) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g14786 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g15707 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g12701 | CHR11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g16130 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g29874 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g16211 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g16726 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g13843 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g32094 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g14615 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g29220 | No alias | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g36172 | No alias | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g36819 | No alias | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Smo155996 | PKL, GYM, CHR6,... | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g067390.4.1 | CHR11, Solyc01g067390 | chromatin remodeling factor (Iswi) | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g065730.3.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g062010.3.1 | SYD, CHR3, Solyc11g062010 | chromatin remodeling factor (Snf2) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g06215 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g14271 | PKL, GYM, CHR6,... | CHD3-type chromaTin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g28925 | PKR1, CHR4 | CHD3-type chromaTin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010908_P001 | CHR5, Zm00001e010908 | Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030969_P003 | SYD, CHR3, Zm00001e030969 | chromatin remodeling factor (Snf2) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e040406_P002 | ATCHR12, Zm00001e040406 | chromatin remodeling factor (Snf2) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
No external refs found! |