- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : AtAIRP1, AIRP1
Description : E3 ubiquitin ligase *(AIRP1) & original description: none
Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g21651 | |
| Cluster | HCCA: Cluster_188 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00263580 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00034890 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00036270 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00098310 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT2G17740 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G27660 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT2G37800 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G37805 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT2G37810 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G42060 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G44370 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G44400 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G43520 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057572 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19929 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13834 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene11277.t1 | Aspi01Gene11277 | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14055.t1 | Aspi01Gene14055 | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene59532.t1 | Aspi01Gene59532 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0408.g068454 | No alias | not classified & original description: CDS=95-1408 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.16G051800.1 | Ceric.16G051800 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G064000.1 | Ceric.18G064000 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G071100.1 | Ceric.18G071100 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16536 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g31920 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36226 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g01391 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025366001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01034093001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g31250.1 | LOC_Os08g31250 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g31280.1 | LOC_Os08g31280 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g20150.1 | LOC_Os09g20150 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g31980.1 | LOC_Os09g31980 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g09590 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_18827g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_4432g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g09555 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g44989 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g60934 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0063.g015605 | No alias | not classified & original description: CDS=1-1329 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g073780.2.1 | Solyc01g073780 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g073800.2.1 | Solyc01g073800 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g073820.4.1 | Solyc01g073820 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g073860.3.1 | Solyc01g073860 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g073890.3.1 | Solyc01g073890 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g068680.1.1 | Solyc02g068680 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g011260.2.1 | Solyc09g011260 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07241 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g21972 | No alias | E3 ubiquiTin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021370_P001 | Zm00001e021370 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |