Spa_g21642

Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none

Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g21642

Target	Alias	Description	ECC score	Gene Family Method
Adi_g085324	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Ala_g14792	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g03331	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Ehy_g15526	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_16547	CIP8	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Lfl_g03286	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Msp_g34982	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g065650.1.1	Solyc02g065650	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum...	0.02	OrthoFinder output from all 47 species
Solyc08g075910.1.1	RHC1A, Solyc08g075910	Probable E3 ubiquitin-protein ligase RHC1A...	0.04	OrthoFinder output from all 47 species
Zm00001e024003_P001	Zm00001e024003	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	398	439
IPR039525	RNF126-like_zinc-ribbon	23	59

External Links

No external refs found!