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  5. Spa_g21055

Spa_g21055 (VSR4, VSR2;1, MTV4, BP80-2;1)


Aliases : VSR4, VSR2;1, MTV4, BP80-2;1

Description : lytic vacuole protein sorting receptor *(VSR) & original description: none


Gene families : OG0000585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g21055

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00189440 VSR6, VSR3;3,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
Adi_g024445 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Adi_g051956 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Adi_g108817 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os12g02390.1 VSR1;1, BP80,... vacuolar sorting receptor (VSR) 0.01 OrthoFinder output from all 47 species
Lfl_g10412 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
MA_10436238g0020 VSR2;2, ATVSR3,... SSU processome assembly factor (UTP12). vacuolar sorting... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR026823 cEGF 531 551
IPR003137 PA_domain 128 196
No external refs found!