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  4. Sequence
  5. Spa_g20897

Spa_g20897


Description : not classified & original description: none


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g20897
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00127550 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G04150 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
AT1G51570 No alias Calcium-dependent lipid-binding (CaLB domain) plant... 0.03 OrthoFinder output from all 47 species
AT1G74720 QKY C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.01 OrthoFinder output from all 47 species
AT3G61300 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 OrthoFinder output from all 47 species
AT4G11610 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.01 OrthoFinder output from all 47 species
Adi_g084659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17037 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38126 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0062.g035196 No alias not classified & original description: CDS=1-3177 0.04 OrthoFinder output from all 47 species
Cba_g78227 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.02G047000.1 Ceric.02G047000 not classified & original description: pacid=50586228... 0.02 OrthoFinder output from all 47 species
Ceric.19G076300.1 Ceric.19G076300 not classified & original description: pacid=50576019... 0.01 OrthoFinder output from all 47 species
Ceric.22G069500.1 Ceric.22G069500 not classified & original description: pacid=50615182... 0.02 OrthoFinder output from all 47 species
Ceric.23G063100.1 Ceric.23G063100 not classified & original description: pacid=50611545... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.73 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.14 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g08953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09813 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g09219 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01008058001 QKY Protein QUIRKY OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_20033 No alias no description available(sp|q9m2r0|ftip3_arath : 959.0) 0.02 OrthoFinder output from all 47 species
LOC_Os05g30750.5 LOC_Os05g30750 no description available(sp|q60ew9|ftip7_orysj : 1527.0) 0.02 OrthoFinder output from all 47 species
LOC_Os05g35480.1 LOC_Os05g35480 no description available(sp|q9m2r0|ftip3_arath : 998.0) 0.02 OrthoFinder output from all 47 species
MA_94243g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 850.0) 0.12 OrthoFinder output from all 47 species
Nbi_g26783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004492 No alias not classified & original description: CDS=1-2934 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011519 No alias not classified & original description: CDS=1-3069 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018526 No alias not classified & original description: CDS=1-3183 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g018999 No alias not classified & original description: CDS=1-828 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019620 No alias not classified & original description: CDS=1-3645 0.02 OrthoFinder output from all 47 species
Solyc01g086720.3.1 Solyc01g086720 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc03g113190.1.1 QKY, Solyc03g113190 Protein QUIRKY OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g080420.3.1 Solyc10g080420 no description available(sp|q9m2r0|ftip3_arath : 846.0) 0.01 OrthoFinder output from all 47 species
Solyc10g080430.1.1 Solyc10g080430 no description available(sp|q9m2r0|ftip3_arath : 1369.0) 0.02 OrthoFinder output from all 47 species
Tin_g08742 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g10684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 1 48
No external refs found!