Spa_g20191 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g20191

Target Alias Description ECC score Gene Family Method Actions
AT4G24390 No alias RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g11099 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Aop_g11731 COI1 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
Ceric.07G073600.1 AFB2, Ceric.07G073600 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dac_g04249 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dac_g09834 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dde_g10385 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g03214 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g03379 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Lfl_g04782 AFB3 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
MA_10189662g0010 AFB2 Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g10590 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Pir_g01031 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ppi_g05252 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g05861 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Smo104859 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g05740 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Tin_g10047 AFB2 substrate adaptor of SCF E3 ubiquiTin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Zm00001e026935_P001 COI1, Zm00001e026935 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Zm00001e028730_P001 COI1, Zm00001e028730 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR041567 COI1_F-box 58 95
IPR041101 Transp_inhibit 116 161
No external refs found!