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  5. Spa_g20096

Spa_g20096 (ATPME2, PME2)


Aliases : ATPME2, PME2

Description : pectin methylesterase & original description: none


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g20096
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00105p00078750 PME44, ATPME44,... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AT1G53840 PME1, ATPME1 pectin methylesterase 1 0.06 OrthoFinder output from all 47 species
AT3G14310 ATPME3, PME3 pectin methylesterase 3 0.03 OrthoFinder output from all 47 species
Aev_g01317 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Als_g35709 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aop_g10654 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07383.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07398.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G055200.1 Ceric.19G055200 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G055900.1 Ceric.19G055900 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z117500.1 ATPME2, PME2,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016500.1 Ceric.30G016500 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016600.1 Ceric.30G016600 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08496 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g09155 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10683 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27414 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27713 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01035108001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
Gb_10523 ATPME3, PME3 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Gb_28387 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os03g18860.1 LOC_Os03g18860 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os04g38560.1 LOC_Os04g38560 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_10372207g0010 No alias pectin methylesterase 0.05 OrthoFinder output from all 47 species
MA_10434624g0010 ATPME2, PME2 Pectinesterase/pectinesterase inhibitor U1 OS=Solanum... 0.04 OrthoFinder output from all 47 species
MA_130858g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_354248g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Ore_g15225 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g32251 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e017514_P001 ATPMEPCRB, Zm00001e017514 pectin methylesterase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 274 457
IPR006501 Pectinesterase_inhib_dom 56 204
No external refs found!