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  5. Spa_g19379

Spa_g19379 (DND1, ATCNGC2, CNGC2)


Aliases : DND1, ATCNGC2, CNGC2

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g19379

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00152360 ATCNGC17,... Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
AMTR_s00210p00019190 CNGC5, ATCNGC5,... Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.03 OrthoFinder output from all 47 species
Aspi01Gene71929.t1 DND1, ATCNGC2,... temperature sensor protein *(CNGC2) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.15 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.58 No alias Putative cyclic nucleotide-gated ion channel 8... 0.01 OrthoFinder output from all 47 species
Len_g54907 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015121 DND2, CNGC4,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Smo84488 DND1, ATCNGC2, CNGC2 Solute transport.channels.VIC superfamily.cyclic... 0.02 OrthoFinder output from all 47 species
Solyc08g069140.4.1 ATCNGC14,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 116 437
No external refs found!