Spa_g19073

Description : not classified & original description: none

Gene families : OG0001572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001572_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g19073

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00255680	evm_27.TU.AmTr_v1...	Beta-carotene isomerase D27, chloroplastic...	0.03	OrthoFinder output from all 47 species
Ehy_g03239	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Gb_18729	No alias	carotenoid isomerase (DWARF27)	0.02	OrthoFinder output from all 47 species
LOC_Os08g02210.2	LOC_Os08g02210	Beta-carotene isomerase D27, chloroplastic...	0.02	OrthoFinder output from all 47 species
Lfl_g11491	No alias	carotenoid isomerase *(DWARF27) & original description: none	0.03	OrthoFinder output from all 47 species
MA_167711g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Nbi_g30675	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g62487	No alias	carotenoid isomerase *(DWARF27) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016874	ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025114	D27-like_C	142	224

External Links

No external refs found!