Spa_g19029


Description : not classified & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g19029
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00158230 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.VETH... 0.04 OrthoFinder output from all 47 species
AT1G47900 No alias Plant protein of unknown function (DUF869) 0.03 OrthoFinder output from all 47 species
Adi_g012789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087236 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28358.t1 Aspi01Gene28358 microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G092400.1 Ceric.13G092400 not classified & original description: pacid=50635125... 0.04 OrthoFinder output from all 47 species
Ceric.26G013900.1 Ceric.26G013900 microtubule assembly factor *(TCS1) & original... 0.03 OrthoFinder output from all 47 species
Len_g16319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12619 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!