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  5. Spa_g18893

Spa_g18893


Description : not classified & original description: none


Gene families : OG0014958 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014958_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18893
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Als_g18801 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07754 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24213 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g07330 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g63513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 301 325
IPR002885 Pentatricopeptide_repeat 399 420
IPR002885 Pentatricopeptide_repeat 227 256
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 328 354
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 426 473
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 630 676
IPR002885 Pentatricopeptide_repeat 527 575
No external refs found!