Spa_g18774 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18774

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g005606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022409 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12498 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13294 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16037 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16630 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16631 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17019 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24397 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30900 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g31201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06797 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33154 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03193 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16820 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22510 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g61630 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0035.g025575 CRR2 not classified & original description: CDS=1-1563 0.03 OrthoFinder output from all 47 species
Azfi_s0082.g038704 No alias not classified & original description: CDS=1-2661 0.04 OrthoFinder output from all 47 species
Azfi_s0326.g065222 No alias not classified & original description: CDS=1-2895 0.03 OrthoFinder output from all 47 species
Cba_g04042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18562 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20780 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g20824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45997 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G072400.1 Ceric.04G072400 not classified & original description: pacid=50630959... 0.03 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.03 OrthoFinder output from all 47 species
Ceric.05G058700.1 Ceric.05G058700 not classified & original description: pacid=50578964... 0.04 OrthoFinder output from all 47 species
Ceric.07G055500.1 Ceric.07G055500 not classified & original description: pacid=50626722... 0.04 OrthoFinder output from all 47 species
Ceric.09G065700.1 Ceric.09G065700 not classified & original description: pacid=50586915... 0.04 OrthoFinder output from all 47 species
Ceric.10G028200.1 Ceric.10G028200 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.12G097500.1 Ceric.12G097500 not classified & original description: pacid=50601961... 0.04 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.06 OrthoFinder output from all 47 species
Ceric.16G016300.1 Ceric.16G016300 not classified & original description: pacid=50589149... 0.03 OrthoFinder output from all 47 species
Ceric.18G014200.1 VAC1, ECB2,... not classified & original description: pacid=50622305... 0.03 OrthoFinder output from all 47 species
Ceric.1Z005100.1 Ceric.1Z005100 not classified & original description: pacid=50567700... 0.03 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.04 OrthoFinder output from all 47 species
Ceric.21G051400.1 VAC1, ECB2,... not classified & original description: pacid=50603510... 0.04 OrthoFinder output from all 47 species
Ceric.21G084300.1 OTP86, Ceric.21G084300 not classified & original description: pacid=50604215... 0.03 OrthoFinder output from all 47 species
Ceric.24G026700.1 Ceric.24G026700 not classified & original description: pacid=50628649... 0.04 OrthoFinder output from all 47 species
Ceric.25G047500.1 Ceric.25G047500 not classified & original description: pacid=50594463... 0.03 OrthoFinder output from all 47 species
Ceric.27G064200.1 Ceric.27G064200 not classified & original description: pacid=50604994... 0.04 OrthoFinder output from all 47 species
Ceric.27G069000.1 Ceric.27G069000 not classified & original description: pacid=50605685... 0.05 OrthoFinder output from all 47 species
Ceric.28G059900.1 Ceric.28G059900 not classified & original description: pacid=50569765... 0.04 OrthoFinder output from all 47 species
Ceric.29G051600.1 Ceric.29G051600 not classified & original description: pacid=50625199... 0.04 OrthoFinder output from all 47 species
Ceric.30G033800.1 Ceric.30G033800 not classified & original description: pacid=50608836... 0.04 OrthoFinder output from all 47 species
Ceric.32G042800.1 Ceric.32G042800 not classified & original description: pacid=50598173... 0.04 OrthoFinder output from all 47 species
Ceric.34G031000.1 CRR22, Ceric.34G031000 not classified & original description: pacid=50623613... 0.05 OrthoFinder output from all 47 species
Ceric.35G003800.1 Ceric.35G003800 not classified & original description: pacid=50581275... 0.03 OrthoFinder output from all 47 species
Ceric.37G010300.1 Ceric.37G010300 not classified & original description: pacid=50616652... 0.04 OrthoFinder output from all 47 species
Ceric.39G007300.1 Ceric.39G007300 not classified & original description: pacid=50582343... 0.06 OrthoFinder output from all 47 species
Ceric.39G028600.1 Ceric.39G028600 not classified & original description: pacid=50582938... 0.05 OrthoFinder output from all 47 species
Dac_g08179 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18410 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21248 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44415 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04874 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05905 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18082 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19140 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22021 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22814 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31261 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g36355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g44055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47826 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g49689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50888 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15835 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Len_g03881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_370961g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
MA_632994g0010 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
Msp_g01336 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05630 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17174 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17377 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12641 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04707 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11066 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17626 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22900 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31399 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34886 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g40280 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g43987 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45487 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR046849 Eplus_motif 701 725
IPR046848 E_motif 633 694
IPR032867 DYW_dom 731 824
IPR002885 Pentatricopeptide_repeat 389 413
IPR002885 Pentatricopeptide_repeat 417 443
IPR002885 Pentatricopeptide_repeat 490 510
IPR002885 Pentatricopeptide_repeat 111 158
IPR002885 Pentatricopeptide_repeat 516 563
IPR002885 Pentatricopeptide_repeat 213 259
IPR002885 Pentatricopeptide_repeat 314 361
IPR002885 Pentatricopeptide_repeat 583 612
No external refs found!